phylogenetics

Maintained by k-dense-ai

Build and analyze phylogenetic trees using MAFFT (multiple alignment), IQ-TREE 2 (maximum likelihood), and FastTree (fast NJ/ML). Visualize with ETE3 or FigTree. For evolutionary analysis, microbial genomics, viral phylodynamics, protein family analysis, and molecular clock studies.

Current version: Unknown
License: Unknown
Network access: Unknown / not assessed
Review status: Not verified

Problem it solves

This catalog entry helps users find and evaluate phylogenetics for the task described by its available catalog summary. Confirm the exact scope in the linked original source when one is available.

When to use it

Consider phylogenetics when its available catalog summary matches the task at hand. When available, review the linked original source before use for precise instructions, requirements, and limitations.

phylogenetics is listed as an agent skill in RefHub. The listed maintainer is k-dense-ai. The available catalog summary is: Build and analyze phylogenetic trees using MAFFT (multiple alignment), IQ-TREE 2 (maximum likelihood), and FastTree (fast NJ/ML). Visualize with ETE3 or FigTree. For evolutionary analysis, microbial genomics, viral phylodynamics, protein family analysis, and molecular clock studies. When available, review the linked original source for exact usage instructions, required tools, and limitations.

Installation and updates

These commands are displayed for copying only and are never executed on RefHub servers. Review the linked upstream source before running them.

Install command

npx skills add k-dense-ai/scientific-agent-skills --skill phylogenetics -y

Agent compatibility

No compatibility test has been recorded

Do not assume agent compatibility until documented test evidence is available.