ensembl-database

Maintained by google-deepmind

Query the Ensembl database to resolve gene, transcript, and protein IDs, fetch genomic or protein sequences, retrieve gene structures (exons), and get variant consequence and effect predictions (VEP). Use this skill as a primary ID translator, genomic sequence database and variant effect prediction tool.

Current version: Unknown
License: Unknown
Network access: Unknown / not assessed
Review status: Not verified

Problem it solves

This catalog entry helps users find and evaluate ensembl-database for the task described by its available catalog summary. Confirm the exact scope in the linked original source when one is available.

When to use it

Consider ensembl-database when its available catalog summary matches the task at hand. When available, review the linked original source before use for precise instructions, requirements, and limitations.

ensembl-database is listed as an agent skill in RefHub. The listed maintainer is google-deepmind. The available catalog summary is: Query the Ensembl database to resolve gene, transcript, and protein IDs, fetch genomic or protein sequences, retrieve gene structures (exons), and get variant consequence and effect predictions (VEP). Use this skill as a primary ID translator, genomic sequence database and variant effect prediction tool. When available, review the linked original source for exact usage instructions, required tools, and limitations.

Installation and updates

These commands are displayed for copying only and are never executed on RefHub servers. Review the linked upstream source before running them.

Install command

npx skills add google-deepmind/science-skills --skill ensembl-database -y

Agent compatibility

No compatibility test has been recorded

Do not assume agent compatibility until documented test evidence is available.